Research Publications Members E-mail us Available positions Rice University Chemistry Department

PUBLICATIONS and PRESENTATIONS

by

Anatoly B. Kolomeisky

THESES
  • M.Sc.
    Investigation of the Process of Synthesis of YBa2Cu3O6+x High-Tc Ceramics in the Presence of Silver (Moscow, 1991).
  • Ph.D.
    One-Dimensional Nonequilibrium Stochastic Models, Interface Models, and Their Applications (Cornell University, 1998)


BOOK CHAPTERS

1. Discrete-State Stochastic Models of Single-Molecule Motor Protein Dynamics (A.B.K.), in "Theoretical and Numerical Approaches to Single-Molecule Data and Analysis" Elseiver, to appear in 2008.

INVITED ARTICLES

  1. Molecular Motors: A Theorists's Perspective (A.B.K and M.E. Fisher), Annual Reviews of Physical Chemistry 58, 675-695 (2007). PDF-download

PUBLICATIONS

  1. Replica-Scaling Analysis of Diffusion in Quenched Correlated Random Media (A.B.K. and E.B.Kolomeisky), Phys. Rev. A (Rapid Communication), 45(8), R5327-5330 (1992). PDF-download
  2. A High-Resolution Fourier Transform Infrared Study of the n3, n4, and n5 Bands of Deuterated Formyl Chloride (DCOCl) (D.-L.Joo, J.Laboy, A.B.K., Q.Zhuo, D.J.Clouthier, C.P.Chan, A.J.Merer, R.H.Judge), J. Mol. Spect. 170, 346-355 (1995). PDF-download
  3. An Invariance Property of the Repton Model (A.B.K. and B.Widom), Physica A, 229, 53-60 (1996). PDF-download
  4. Fluctuations in the Structure of Interfaces (D.J.Bukman, A.B.K., and B.Widom), Coll. Surf. A: Physicochem. Eng. Asp. 128, 119-128 (1997). PDF-download
  5. Exact Solutions for a Partially Asymmetric Exclusion Model with Two Species (A.B.K.), Physica A, 245, 523-533 (1997). PDF-download
  6. Asymmetric Simple Exclusion Model with Local Inhomogeneity (A.B.K.), J. Phys. A: Math. Gen., 31, 1153-1164 (1998).PDF-download
  7. Phase Diagram of One-Dimensional Driven Lattice Gases with Open Boundaries (A.B.K., G.M.Schütz, E.B.Kolomeisky, and J.P.Straley), J. Phys. A: Math. Gen., 31, 6911-6919 (1998).PDF-download
  8. A Simplified ``Ratchet" Model of Molecular Motors (A.B.K. and B.Widom ), J. Stat. Phys., 93, 633-645 (1998).
  9. Test of the Stability of Three-phase Equilibrium with Negative Line Tension [abstract] (A.E.van Giessen, A.B.K., and B.Widom), Abstract Papers of American Chemical Society, 216, U-645, Part 1 (1998).
  10. The Force Exerted by a Molecular Motor (M.E.Fisher and A.B.K.), Proc. Natl. Acad. Sci. USA, 96, 6597-6602 (1999).PDF-download
  11. Model of the Hydrophobic Interaction (A.B.K. and B.Widom), Faraday Discussion, 112, 81-89 (1999).PDF-download
  12. Molecular Motors and the Forces they Exert (M.E.Fisher and A.B.K.), Proc. NATO Advanced Research Workshop, May 1999, Budapest, Statistical Physics Applied to Practical Problems, (Elsevier, 1999), and Physica A 274, 241-266 (1999). PDF-download
  13. Periodic Sequential Kinetic Models with Jumping, Branching and Deaths (A.B.K. and M.E.Fisher), Physica A 279, 1-20 (2000).PDF-download
  14. Extended Kinetic Models with Waiting-Time Distributions: Exact Results (A.B.K. and M.E.Fisher), J. Chem. Phys. 113, 10867-10877 (2000).PDF-download
  15. Force-Velocity Relation for Growing Microtubules (A.B.K. and M.E.Fisher) Biophys. J. 80, 149-154 (2001).PDF-download
  16. Simple Mechanochemistry Describes the Dynamics of Kinesin Molecules (M.E.Fisher and A.B.K), Proc. Natl. Acad. Sci. USA, 98, 7748-7753 (2001).PDF-download
  17. Exact Results for Parallel Chains Kinetic Models of Biological Transport (A.B.K.), J. Chem. Phys. 115 7253-7259 (2001).PDF-download
  18. Lattice Models of Ionic Systems ( V. Kobelev, A.B.K. and M.E.Fisher), J.Chem.Phys. 116, 7589-7598 (2002).PDF-download.
  19. Anisotropic Lattice Models of Electrolytes (V.Kobelev and A.B.K.), J.Chem.Phys.,117,8879-8885 (2002).PDF-download.
  20. The Effect of Detachments in Asymmetric Simple Exclusion Processes (N. Mirin and A.B.K.), J.Stat.Phys.,110,811-823 (2003).PDF-download.
  21. A Simple Kinetic Model Describes the Processivity of Myosin V (A.B.K. and M.E.Fisher), Biophys. J.,84,1642-1650 (2003).PDF-download.
  22. Lattice Models of Ionic Systems with Charge Aymmetry (M.N.Artyomov, V.Kobelev and A.B.K.), J.Chem. Phys. 118, 6394-6402 (2003). PDF-download.
  23. Polymer Translocation Through a Long Nanopore (A.B.K. and E.Slonkina), J. Chem. Phys. 118, 7112-7118 (2003).PDF-download
  24. Localized Shocks in Driven Diffusive Systems without Particle Number Conservation (V. Popkov, A. Rakos, G.M. Schutz, R.D. Willmann and A.B.K.), Phys. Rev. E 67, 066117 (2003). PDF-download
  25. Thermodynamics of Electrolytes on Anisotropic Lattices (V. Kobelev, A.B.K and A.Z. Panagiotopoulos), Phys. Rev. E 68, 066110 (2003).PDF-download
  26. Local Inhomogeneity in Asymmetric Simple Exclusion Processes with Extended Objects ( L.B. Shaw, A.B.K. and K.H. Lee)), J. Phys. A: Math. Gen. 37 2105-2113 (2004). PDF-download
  27. Polymers Dynamics in Repton Model at Large Fields (A.B.K and A. Drzewinski), J. Chem. Phys. 120 7784-7791 (2004). PDF-download
  28. Simple Growth Models of Rigid Multifilament Biopolymers (E.B.Stukalin and A.B.K.), J. Chem. Phys. 121, 1097-1104 (2004). PDF-download
  29. Two-Channel Totally Asymmetric Exclusion Processes (E. Pronina and A.B.K.), J. Phys. A: Math. Gen. 37, 9907-9918 (2004). PDF-download
  30. Steady-State Properties of a Totally Asymmetric Exclusion Process with Periodic Structure Rates ( G. Lakatos, T. Chou and A.B.K.), Phys. Rev. E. 71, 011103 (2005). PDF-download
  31. Polymerization Dynamics of Double-Stranded Biopolymers: Chemical Kinetic Approach (E.B.Stukalin and A.B.K.), J. Chem. Phys. 122, 104903 (2005). PDF-download
  32. Understanding Mechanochemical Coupling in Kinesins Using First-Passage Time Processes (A.B.K., A. Popov and E.B. Stukalin), Phys. Rev. E 71, 031902 (2005). PDF-download
  33. Nucleation of Ordered Solid Phases of Proteins via Unstable and Metastable High-Density States: Phenomenological Approach (W. Pan, A.B.K. and P.G. Vekilov), J. Chem. Phys. 122, 174905 (2005). PDF-download
  34. Dynamic Force Spectroscopy of Glycoprotein Ib-IX Mutants and von Wildebrand Factor (M. Arya, A.B.K., G.M. Romo, M.A. Cruz, J.A. Lopez and B. Anvari) , Biophys. J. 88, 4391-4401 (2005). PDF-download
  35. Coupling of Two Motor Proteins: a New Motor Can Move Faster (E.B. Stukalin, H. Phillips III and A.B.K.), Phys. Rev. Lett. 94, 238101 (2005) . PDF-download
  36. Kinetics of Two-Step Nucleation of Crystals (D. Kashchiev, P. Vekilov and A.B.K.), J. Chem. Phys. 122, 244706 (2005). PDF-download
  37. Theoretical Investigation of Totally Asymmetric Simple Exclusion Processes on Lattices with Junctions (E. Pronina and A.B.K.), J. Stat. Mech., P07010 (2005). PDF-download
  38. Thermodynamics and Phase Transitions of Electrolytes on Lattices with Different Discretization Parameters (M.N. Artyomov and A.B.K.), Mol. Phys. 103, 2863-2872 (2005). PDF-download
  39. Dynamic Properties of Motor Proteins with Two Subunits (A.B.K. and H. Phillips III), J. Phys. Cond. Matter 17, S3887-S3899 (2005). PDF-download
  40. Monte Carlo Simulations of Rigid Biopolymer Growth Processes (Jenny Son, G. Orkoulas and A.B.K.), J. Chem. Phys. 123, 124902 (2005). PDF-download
  41. Dynamics of Polymer Translocation Through Nanopore: Theory Meets Experiments (S. Matysiak, A. Montesi, M. Pascuali, A.B.K. and C. Clementi), Phys. Rev. Lett. 96, 118103 (2006). PDF-download
  42. ATP Hydrolysis Stimulates Large Length Fluctuations in Single Actin Filaments (E.B.Stukalin and A.B.K.), Biophys. J. 90, 2673-2685 (2006). PDF-download
  43. Dynamic Phase Transitions in Coupled Motor Proteins (E.B.Stukalin and A.B.K.), Phys. Rev. E 73, 031922 (2006). PDF-download
  44. Transport of Single Molecules Along the Periodic Parallel Lattices with Coupling (E.B.Stukalin and A.B.K.), J. Chem. Phys. 124, 204901 (2006). PDF-download
  45. Effect of Orientation in Translocation of Inhomogeneous Polymers through Nanopores (S. Kotsev and A.B.K.), J. Chem. Phys. 125, 084906 (2006). PDF-download
  46. Asymmetric Coupling in Two-Channel Simple Exclusion Processes (E. Pronina and A.B.K.), Physica A 372, 12-21 (2006). PDF-download
  47. Direct Measurement of the Dissociation Kinetics of Escherichia coli Exonuclease I from Single Stranded DNA Using a Nanopore (B. Hornblower, A. Combs, R. Whitaker, A.B.K., A. Meller and M. Akeson), Nature Methods 4, 315-317 (2007). PDF-download
  48. Spontaneous Symmetry Breaking in Two-Channel Asymmetric Exclusion Processes with Narrow Entrances (E.Pronina and A.B.K.), J. Phys. A: Math. Theor. 40, 2275-2286 (2007). PDF-download
  49. Channel-Facilitated Molecular Transport Across Membranes: Attraction, Repulsion and Asymmetry (A.B.K.), Phys. Rev. Lett. 98, 048105 (2007). PDF-download
  50. Solutions of Burnt-Bridge Model for Molecular Motors Transport (A. Morozov, E. Pronina, A.B.K. and M.N. Artyomov), Phys. Rev. E 75, 031910 (2007). PDF-download
  51. Dynamic Properties of Molecular Motors in Burnt-Bridge Models (M.N. Artyomov, A. Y. Morozov, E. Pronina and A.B.K.), J. Stat. Mech. P08002 (2007). PDF-download
  52. Translocation of Polymers with Folded Configurations across Nanopores (S. Kotsev and A.B.K.), J. Chem. Phys. 127, 185103 (2007). PDF-download
  53. Dynamic Properties of Molecular Motor Dimers in Burnt-Bridge Models (A. Y. Morozov and A.B.K.), J. Stat. Mech. P12008 (2007). PDF-download
  54. How Proteins Translocate Through Pores: Memory is Important (A.B.K.), Biophys. J. 94, 1547 (2008). PDF-download
  55. Effect of Interactions on Molecular Fluxes and Fluctuations in the Transport across Membrane Channels (A.B.K. and S. Kotsev), J. Chem. Phys. 128, 085101 (2008). PDF-download
  56. Inhomogeneous Coupling in Two-Channel Asymmetric Exclusion Processes (K. Tsekouras and A.B.K.), J. Phys. A: Math. Theor. 41, 095002 (2008). PDF-download
  57. Protein-DNA Interactions: Reaching and Recognizing the Targets (A.G. Cherstvy, A.B.K. and A.A. Kornyshev ), J. Phys. Chem. B 112, 4741-4750 (2008). PDF-download
  58. Molecular Dynamics of Surface-Moving Thermally Driven Nanocars (A. Akimov, A.V. Nemukhin, A. Moskovsky, A.B.K. and J.M. Tour), J. Chem. Theor. Comp. 4, 652-656 (2008). PDF-download
  59. Effect of Charge Distribution on the Translocation of an Inhomogeneously Charged Polymer Through a Nanopore (A. Mohan, A.B.K. and M. Pasquali), J. Chem. Phys. 128, 125104 (2008). PDF-download
  60. Molecular Motors Interacting with Their Own Tracks (M.N. Artyomov, A.Y. Morozov and A.B.K.), to appear in Phys. Rev. E (2008).
  61. Spatial Fluctuations Affect the Dynamics of Motor Proteins (R.K. Das and A.B.K.), to appear in J. Phys. Chem. B (2008).
  62. Polymer Translocation through Pores with Complex Geometry (A. Mohan, A.B.K. and M. Pasquali), submitted to J. Chem. Phys. (2008).
  63. Dynamics of Molecular Motors in Reversible Burnt-Bridge Models (M.N. Artyomov, A.Y. Morozov and A.B.K.), in preparation (2008).
  64. Dynamic Properties of Molecular Motors in the Divided-Pathway Model (R.K. Das and A.B.K.), in preparation (2008).
  65. Coupling of Parallel Symmetric and Asymmetric Exclusion Processes (K. Tsekouras and A.B.K.), in preparation (2008).
INVITED TALKS
  1. Domain-Wall Picture of Asymmetric Simple Exclusion Processes, Department of Chemistry, University of California, San Diego, January 1998.
  2. Motor Proteins and the Forces They Exert, Department of Chemistry, Washington University, St. Louis, December, 1999.
  3. Motor Proteins and the Forces They Exert, Department of Chemistry, University of Nevada, Reno, December, 1999.
  4. Motor Proteins and the Forces They Exert, Department of Chemistry, Duke University, Durham, NC January, 2000.
  5. Motor Proteins and the Forces They Exert, Department of Chemistry, Rice University, Houston, January, 2000.
  6. Motor Proteins and the Forces They Exert, Department of Chemistry, Virginia Polytechnic Institute and State University, Blacksburg, January, 2000.
  7. Nanotechnology: What Can We Learn from Biology, The International Conference NANOSPACE 2001, Galveston, Texas, March, 2001.
  8. Stochastic Models of Biological Transport, Department of Physics, Sam Houston State University, Huntsville, Texas, September, 2001.
  9. Stochastic Models of Biological Transport, Department of Chemistry, University of Houston, Houston, Texas, October, 2001.
  10. Stochastic Models of Biological Transport, Department of Biology, Moscow State University, Moscow, Russia, December, 2001.
  11. Polymer Translocation Through a Long Nanopore, Department of Chemistry, University of California at Berkeley, February, 2002.
  12. Polymer Translocation Through a Long Nanopore, Department of Chemistry, University of California at Los Angeles, March, 2002.
  13. Polymer Translocation Through a Long Nanopore, Department of Chemistry, University of Southern California, March, 2002.
  14. Stochastic Models of Biological Transport, Department of Chemistry, Moscow State University, Moscow, Russia, May, 2002.
  15. Polymer Translocation Through a Long Nanopore, Institute for Physical Science and Technology, University of Maryland, August, 2002
  16. Lattice Models of Electrolytes, Department of Mathematics, Rice University, Houston,September, 2002.
  17. Simple Stochastic Models Can Explain the Dynamics of Motor Proteins, Symposium COOPERATIVITY IN BIOPHYSICAL SYSTEMS, Institute fur Festkoerperforschung at Forschungcentrum Juelich, Germany, October, 2002.
  18. Polymer Translocation Through a Long Nanopore,19-th Southwestern Theoretical Chemistry Conference, University of Houston,November, 2002
  19. Polymer Translocation Through a Long Nanopore,Department of Chemistry, Moscow State University, Moscow, Russia, December, 2002.
  20. Stochastic Models with Waiting-Time Distributions for Translocatory Motor Proteins 225-th American Chemical Society National Meeting, New Orleans, March 2003.
  21. Dynamics of Polymer Translocation Through a Long Nanopore, Department of Chemical Engineering, University of Houston, April, 2003.
  22. Effect of Detachments in Asymmetric Simple Exclusion Processes European Research Council Chemistry Committees Workshop on Computer Modeling of Chemical and Biological Systems, Porto, Portugal, May 2003.
  23. Physical-Chemical Analysis of the Factors Influencing the Behavior of Flasks During the Heating in Jewelry Casting Process. Development of the Optimal Model of Burnout Furnace 2-nd International Jewelry Symposium JEWELRY MANUFACTURING: TECHNOLOGIES, MAIN PROBLEMS AND PROSPECTS, Saint Petersburg, Russia, July 2003.
  24. Simple Models of Electrolytes, 15-h American Conference on Crystal Growth and Epitaxy, Keystone, Colorado, July 2003.
  25. Dynamics of Polymer Translocation Through a Long Nanopore, Department of Chemistry, University of Washington, Seattle, October 2003.
  26. Lattice Models of Electrolytes, Department of Physics, University of Washington, Seattle, October 2003.
  27. Phenomenological Theory of Protein Nucleation Phenomena, Institute for Physical Science and Technology, University of Maryland, College Park, November 2003.
  28. Dynamics of Polymer Translocation Through a Long Nanopore, Department of Chemical Engineering, Princeton University, December 2003.
  29. Nucleation of Ordered Solid Phases of Proteins via Unstable and Metastable High-Density States: Phenomenological Approach, Spring 2004 Materials Research Society, San Francisco, April 2004.
  30. Effect of Detachments in Asymmetric Simple Exlusion Processes, Fock School on Quantum and Computational Chemistry, Novgorod, Russia, April 2004.
  31. Lattice Models of Electrolytes, Institute of Condensed Matter Physics, Ukrainian Academy of Science, Lviv, Ukraine, May 2004.
  32. Understanding Mechanochemical Coupling in Kinesins Using First-Passage Times, Proteomics Workshop IV: Molecular Machines, Institute for Pure and Applied Mathematics, University of California, Los Angeles, May 2004.
  33. Physical-Chemical Analysis of the Factors Influencing the Behavior of Flasks During the Heating in Jewelry Casting Process: Development of the Optimal Model of Burnout Furnace , Santa Fe Symposium, Albuquerque, New Mexico, May 2004.
  34. Simple Stochastic Models of Motor Protein Dynamics, SIAM Conference on Mathematical Aspects of Material Science, Los Angeles, May 2004.
  35. Dynamics of Polymer Translocation Through a Nanopore: Theory Meets Experiments, International Conference on Biological Physics, Goteborg, Sweden, August 2004.
  36. Dynamics of Polymer Translocation Through a Nanopore: Theory Meets Experiments, Department of Chemistry, Iowa State University, Ames, Iowa, September 2004.
  37. Simple Models of Rigid Multifilament Biopolymers's Growth Dynamics, Department of Physics, Brandeis University, Waltham, Massachussetts, October 2004.
  38. Can We Understand the Complex Dynamics of Motor Protein Using Simple Stochastic Models?, BU-Harvard-MIT Theoretical Chemistry Lecture Series, Boston, October 2004.
  39. Dynamics of Polymer Translocation Through a Nanopore: Theory Meets Experiments, Materials Research Laboratory, University of California, Santa Barbara, October 2004.
  40. Simple Models of Rigid Multifilament Biopolymer's Growth Dynamics, Department of Chemical Engineering, University of California, Los Angeles, October 2004.
  41. Dynamics of Polymer Translocation Through a Nanopore: Theory Meets Experiments, Department of Chemistry, University of Pennsilvania, Philadelphia, December 2004.
  42. Coupling of Two Motor Proteins: a New Motor Can Move Faster , Department of Chemistry, Cornell University, Ithaca, New York, May 2005.
  43. Coupling of Two Motor Proteins: a New Motor Can Move Faster , 6-th SIAM Conference on Control and its Applicability, Symposium on Brownian Motors and Protein Dynamics, New Orleans, July 2005.
  44. Coupling of Two Motor Proteins: a New Motor Can Move Faster , The Telluride Scientific Research Workshop "Single-Molecule Measurements: Kinetics, Fluctuations, and Non-Equilibrium Thermodynamics," Telluride, Colorado, August 2005.
  45. Coupling of Two Motor Proteins: a New Motor Can Move Faster, McGovern Lecture in Biomedical Computing and Imaging, Texas Medical Center, September 2005.
  46. Growth Dynamics of Cytoskeleton Proteins: Multiscale Theoretical Analysis, Workshop I: Multiscale Modeling in Soft Matter and Biophysics, Institute for Pure and Applied Mathematics, University of California Los Angeles, September 2005.
  47. Coupling of Two Motor Proteins: a New Motor Can Move Faster, Department of Chemistry, University of Montreal, Canada, November 2005.
  48. Coupling of Two Motor Proteins: a New Motor Can Move Faster, Institute for Physical Science and Technology, University of Maryland, College Park, December 2005.
  49. Asymmetric Exclusion Processes on Parallel Channels, Indian Institute of Technology, Kanpur, India, February 2006.
  50. Coupling of Two Motor Proteins: a New Motor Can Move Faster, Department of Chemistry, University of Wisconsin, Madison, March 2006.
  51. Can We Understand the Complex Dynamics of Motor Proteins Using Simple Stochastic Models? International Workshop on Stochastic Models in Biological Sciences, Warsaw, Poland, May 2006.
  52. Growth Dynamics of Cytoskeleton Proteins: Multiscale Theoretical Analysis, International Workshop on Multiscale Modeling of Complex Fluids, Prato, Italy, July 2006.
  53. Channel-Facilitated Molecular Transport Across Membranes: Attraction, Repulsion and Asymmetry, Statistical Mechanics Meeting, Rutgers University, New Jersey, December 2006.
  54. Coupling of Two Motor Proteins: a New Motor Can Move Faster, Department of Chemistry, University of Nevada, Reno, February 2007.
  55. Discrete Stochastic Models of Single-Molecule Motor Protein Dynamics, Workshop Theory, Modeling and Evaluation of Single-Molecule Measurements, Lorentz Center, University of Leiden, Netherlands, April 2007.
  56. Burnt-Bridge Model of Molecular Motor Transport, SIAM Conference on Applications of Dynamical Systems, Snowbird, Utah, May 2007.
  57. Nucleation of Ordered Solid Phases of Proteins via Unstable and Metastable High-Density States: Phenomenological Approach, Gordon Research Conference on "Thin Films and Growth Mechanisms," Mount Holyoke College, South Hadley, Massachustts, June 2007.
  58. Channel-Facilitated Molecular Transport Across Membranes: Attraction, Repulsion and Asymmetry, Telluride Research Workshop: "Nonequilibrium Phenomena, Nonadiabatic Dynamics and Spectroscopy." Telluride, Colorado, July 2007.
  59. Channel-Facilitated Molecular Transport Across Membranes: Attraction, Repulsion and Asymmetry, 234-th American Chemical Society Annual Meeting, Boston, August 2007.
  60. How Proteins Find Its Targets on DNA: Mechanism of Facilitated Diffusion , University of Texas, Austin, September 2007.
  61. Can We Understand the Complex Dynamics of Motor Proteins Using Simple Stochastic Models? University of Texas Medical Branch, Galveston, Texas, September 2007.
  62. How Proteins Find Its Targets on DNA: Mechanism of Facilitated Diffusion, Bar-Ilan University, Department of Physics Colloquium, Ramat-Gan, Israel, November 2007.
  63. How Proteins Find Its Targets on DNA: Mechanism of Facilitated Diffusion, Technion, Department of Physics, Haifa, Israel, December 2007.
  64. How Proteins Find Its Targets on DNA: Mechanism of Facilitated Diffusion, University of Tel Aviv, Department of Chemistry, Tel-Aviv, Israel, December 2007.
  65. How Proteins Find Its Targets on DNA: Mechanism of Facilitated Diffusion, Weizmann Research Institute, Rehovot, Israel, December 2007.
  66. Molecular Motors Interacting with Their Own Tracks , Annual SIAM Conference, San Diego, California, July 2008.
  67. Molecular Motors Interacting with Their Own tracks , International Conference on Statistical Physics SIGMAPHI2008, Crete, Greece, July 2008.
CONTRIBUTED PRESENTATIONS
  1. High-Temperature Chemistry of Fullerenes, Gordon Research Conference on High-Temperature Chemistry , Meriden, NH, July 1992.
  2. New Results in a Repton Model, Polymer Outreach Program, Cornell University, May 1995.
  3. High-Field Dynamics of Polymers in a Repton Model, Polymer Outreach Program, Cornell University, May 1996.
  4. Asymptotically Exact Results for a Repton Model of Polymer Dynamics, 76th Statistical Mechanics Meeting, Rutgers University, December 1996.
  5. Asymmetric Simple Exclusion Model with Stochastic Defect, Polymer Outreach Program, Cornell University, May 1997.
  6. Domain-Wall Picture of Asymmetric Simple Exclusion Processes, 78th Statistical Mechanics Meeting, Rutgers University, December 1997.
  7. A Simplified ``Ratchet" Model of Molecular Motors, Polymer Outreach Program, Cornell University, May 1998.
  8. Debye-Huckel Theory of Electrolytes on a Lattice, Conf. on Electrostatic Properties in Complex Fluids, ITP, University of California, Santa Barbara, CA, October 1998.
  9. Debye-Huckel Theory on a Lattice, 80th Statistical Mechanics Meeting, Rutgers University, December 1998.
  10. Velocity and Diffusion of General Hopping Models and Tridiagonal Matrices, 81-st Statistical Mechanics Meeting, Rutgers University, May 1999.
  11. Lattice Models for Ionic Systems, Gordon Research Conference on Chemistry and Physics of Liquids, Holderness, NH, August 1999.
  12. Improved Kinetic Models for Processive Motor Proteins: Explicit Results for Periodic 1D Hopping, 82-nd Statistical Mechanics Meeting, Rutgers University, December 1999.
  13. One-dimensional Kinetic Models with Death and Branching Processes, Pitzer Memorial Symposium on Theoretical Chemistry, University of California, Berkeley, January, 2000.
  14. Exact Results for Parallel Chain Kinetic Models of Biological Transport, 83-rd Statistical Mechanics Meeting, Rutgers University, May 2000.
  15. Describing Kinesin Dynamics Using Stochastic Models. National Academy of Sciences Colloquium, Molecular Kinesis in Cellular Function and Plasticity, Irvine, CA, December 2000.
  16. One-Layer Model of the Growth of Microtubules, 84-th Statistical Mechanics Meeting, Rutgers University, December 2000.
  17. The Growth of Microtubules Against an External Force, 45-th Annual Biophysical Society Meeting, Boston, February, 2001.
  18. Description of Motor Protein Motility Using Stochastic Models, International Conference on Mathematical and Theoretical Biology, Hilo, Hawaii, July 2001.
  19. Exact Results for Parallel-Chain Kinetic Models of Biological Transport, International Conference NANOBIOLOGY 2001, Emory University, Atlanta, October 2001.
  20. The Dynamics of Breaking of Weak Chemical Bonds. What Is Measured in AFM Experiments, Statistical Mechanics Meeting, Rutgers University, December 2001.
  21. A Simple Kinetic Model Can Explain the Motility of Myosin V Molecules, 46th Annual Biophysical Society Meeting, San Francisco, February 2002.
  22. Polymer Translocation Through a Long Nanopore, Statistical Mechanics Meeting, Rutgers University, December 2002.
  23. Dynamics of Polymer Translocation Through a Long Nanopore, 47-th Annual Biophysical Society Meeting, San Antonio, March 2003.
  24. Nucleation of Ordered Solid Phases of Proteins via Unstable and Metastable High-Density States: Phenomenological Approach, Rutgers University, December 2003.
  25. Simple Models of the Growth of Microtubules, 48-th Annual Biophysical Society Meeting, Baltimore, February 2004.
  26. Thermodynamics and Phase Transitions of Electrolytes on Lattices with Different Discretization Parameters, Annual Meeting of American Physical Society, Montreal, Canada, March 2004.
  27. Understanding Mechanochemical Coupling in Kinesins Using First-Passage Time Processes, 49-th Annual Biophysical Society Meeting, Long Beach, California, February 2005.
  28. Nucleation of Proteins via Intermediate States: Phenomenological Approach, Liquid Matter Conference, Utrecht, Netherlands, July 2005.
  29. Thermodynamics and Phase Transitions of Electrolytes on Lattices with Different Discretization Parameters, Liquid Matter Conference, Utrecht, Netherlands, July 2005.
  30. ATP Hydrolysis Stimulates Large Length Fluctuations in Single Actin Filaments, 50-th Annual Biophysical Society Meeting, Salt Lake City, Utah, February 2006.
  31. Interaction Between Motor Heads Strongly Effects Dynamical and Biophysical Properties of Motor Proteins, Biophysical Discussions Meeting, Asilomar, California, October 2006.
  32. Effect of Orientation in Translocation of Inhomogeneous Polymers through Nanopores, 51-st Annual Biophysical Society Meeting, Baltimore, Maryland, March 2007.
  33. Channel-Facilitated Molecular Transport Across Membranes: Attraction, Repulsion and Asymmetry, 23-rd International Conference on Statistical Physics, Genoa, Italy, July 2007.
  34. How Proteins Find and Recognize Their Targets on DNA, 52-nd Annual Biophysical Society Meeting, Long Beach, California, February 2008.

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